JBioWH Webservices
Developed by: Roberto Vera Alvarez
Email: Roberto.Vera@icgeb.org
JBioWH Project Site
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DataSet
Taxonomy
Ontology
Gene
GenePTT
GenBank
OMIM
Protein
DrugBank
PirSF
GenePTT access
Get the number of GenePTT available:
http://pongor.itk.ppke.hu//jbiowh-webservices/webservices/geneptt/count
Get one GenePTT by ProteinGi:
http://pongor.itk.ppke.hu//jbiowh-webservices/webservices/geneptt/
Get from/to GenePTT by range:
http://pongor.itk.ppke.hu//jbiowh-webservices/webservices/geneptt/1/3
Get GenePTTs from a PTT file:
http://pongor.itk.ppke.hu//jbiowh-webservices/webservices/geneptt/chromosome/NC_009504
Get GenePTTs from a PTT file using from/to range:
http://pongor.itk.ppke.hu//jbiowh-webservices/webservices/geneptt/chromosome/NC_009504/700077/744610
Search GenePTTs by string using % (Search over the fields: ProteinGi, PTT File name, Gene symbol, locustag, in this order. Use %25 for the wildcard):
ProteinGi:
http://pongor.itk.ppke.hu//jbiowh-webservices/webservices/geneptt/search/
PTT File name:
http://pongor.itk.ppke.hu//jbiowh-webservices/webservices/geneptt/search/NC_01739%25
Gene symbol:
http://pongor.itk.ppke.hu//jbiowh-webservices/webservices/geneptt/search/4hbD
Locustag:
http://pongor.itk.ppke.hu//jbiowh-webservices/webservices/geneptt/search/AM1_H0113
External data links
GeneInfo
Get Genes from a PTT file:
http://pongor.itk.ppke.hu//jbiowh-webservices/webservices/geneptt/chromosome/NC_009504/geneinfo
Get Genes from a PTT file using from/to range:
http://pongor.itk.ppke.hu//jbiowh-webservices/webservices/geneptt/chromosome/NC_009504/700077/744610/geneinfo
Protein
Get the Proteins by ProteinGi:
http://pongor.itk.ppke.hu//jbiowh-webservices/webservices/geneptt//protein
Get Proteins from a PTT file:
http://pongor.itk.ppke.hu//jbiowh-webservices/webservices/geneptt/chromosome/NC_009504/protein
Get Proteins from a PTT file using from/to range:
http://pongor.itk.ppke.hu//jbiowh-webservices/webservices/geneptt/chromosome/NC_009504/700077/744610/protein