International Centre for Genetic Engineering and Biotechnology
Practical Course
"Bioinformatics: Computer Methods in Molecular Biology"
AREA Science Park - Trieste, ITALY
20-25 June 2011
PRELIMINARY PROGRAMME
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MONDAY, 20 June |
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08:00 |
Pick-up from Hotel |
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08:30 |
Course Registration |
ICGEB Foyer, W Building |
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09:15 |
Welcome Address |
Seminar Room, ICGEB |
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09:30 |
Bioinformatics and knowledge representation: theoretical intro to the course |
Sándor Pongor
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10:45 |
BREAK |
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11:15 |
Understanding biological systems |
Sándor Pongor
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12:30 |
The ICGEB computer system, course infrastructure |
Informatics Laboratory, E3 Building Dario Palmisano, Sándor Pongor (ICGEB, Trieste, Italy) |
| 13:30 | LUNCH | Cafeteria, Ground Floor, 'C' Building |
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14:30 |
Sequence analysis, database searching, |
David Judge, Jack Leunissen |
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18:00 |
Get-Together Party |
ICGEB Foyer, W Building |
| 19:00 |
BUS TO HOTEL |
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TUESDAY, 21 June |
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08:30 |
Pick-up from Hotel |
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09:00 |
Sequence analysis, database searching, (cont.) |
David Judge, Jack Leunissen |
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11:00 |
BREAK |
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11:30 |
Sequence analysis, database searching, (cont.) |
David Judge, Jack Leunissen |
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13:30 |
LUNCH |
Cafeteria, Ground Floor, 'C' Building |
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14:30 |
Sequence analysis, database searching, (cont.) |
David Judge, Jack Leunissen |
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18:00 |
BUS TO HOTEL |
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WEDNESDAY, 22 June |
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08:30 |
Pick-up from Hotel |
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09:00 |
Sequence analysis, database searching, (cont.) |
David Judge, Jack Leunissen |
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11:00 |
BREAK |
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11:30 |
Sequence analysis, database searching, (cont.) |
David Judge, Jack Leunissen |
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13:30 |
LUNCH |
Cafeteria, Ground Floor, Building C |
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14:30 |
KEGG: Kyoto Encyclopedia of Genes and Genomes |
Minoru Kanehisa, Kyoto University and University of Tokyo |
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18:00 |
BUS TO HOTEL |
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THURSDAY, 23 June |
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08:30 |
Pick-up from Hotel |
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09:00 |
The National Center for Biotechnology Information (NCBI) services, nucleic acid databases |
David Landsman, (NIH/NLM/NCBI, Bethesda, MD, USA)
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11:00 |
BREAK |
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11:30 |
The NCBI services |
David Landsman, (NIH/NLM/NCBI, Bethesda, MD, USA)
 Get Tutorial
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13:30 |
LUNCH |
Cafeteria, Ground Floor, Building C |
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14:30 |
Protein sequence databases, UniProt |
Marie-Claude Blatter (Swiss Bioinformatic Institute)
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18:00 |
BUS TO HOTEL |
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FRIDAY, 24 June |
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08:30 |
Pick-up from Hotel |
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09:00 |
Sequence analysis, database searching, (cont.) |
David Judge, Jack Leunissen |
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11:00 |
BREAK |
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11:30 |
Sequence analysis, database searching (cont.) |
David Judge, Jack Leunissen |
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13:30 |
LUNCH |
Cafeteria, Ground Floor, Building C |
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14:30 |
Genome computing, phylogeny |
Martin Bishop, Cambridge, UK,
Jack Leunissen, David Judge |
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18:00 |
BUS TO HOTEL |
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SATURDAY, 25 June |
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08:30 |
Pick-up from Hotel |
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09:00 |
Genome computing, phylogeny |
Martin Bishop, Cambridge, UK, Jack Leunissen, David Judge |
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10:30 |
BREAK |
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11:00 |
Genome computing, phylogeny |
Martin Bishop, Cambridge, UK, Jack Leunissen, David Judge |
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13:00 |
LUNCH |
ICGEB premises, ‘W’ Building |
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14:00 |
The European Bioinformatics Institute (EBI) services |
Jennifer McDowall EBI, Hinxton, UK
Get Tutorial
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18:00 |
BUS TO HOTEL |
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