International Centre for Genetic Engineering and Biotechnology
Practical Course
"Bioinformatics: Computer Methods in Molecular Biology"
AREA Science Park - Trieste, ITALY
25-30 June 2012
PRELIMINARY PROGRAMME
(UNDER CONSTRUCTION)
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MONDAY, 25 June |
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08:00 |
Pick-up from Hotel Roma |
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08:30 |
Course Registration |
ICGEB Foyer, W Building |
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09:15 |
Welcome Address |
ICGEB Seminar Room, "W" Building |
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09:30 |
Bioinformatics and knowledge representation: theoretical intro to the course |
Sándor Pongor
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10:45 |
BREAK |
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11:15 |
The ICGEB computer system, course infrastructure |
Informatics Laboratory, E3 Building Dario Palmisano, Sándor Pongor (ICGEB, Trieste, Italy) |
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12:30 |
Sequence analysis, database searching |
David Judge, University of Cambridge, UK |
| 13:30 | LUNCH | Cafeteria, Ground Floor, 'C' Building |
14:30 |
Sequence analysis, database searching, (cont.) |
David Judge |
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18:00 |
Get-Together Party |
ICGEB Foyer, W Building |
| 19:00 |
BUS TO HOTEL |
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TUESDAY, 26 June |
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08:30 |
Pick-up from Hotel |
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09:00 |
Sequence analysis, database searching, (cont.) |
David Judge |
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11:00 |
BREAK |
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11:30 |
Sequence analysis, database searching, (cont.) |
David Judge |
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13:30 |
LUNCH |
Cafeteria, Ground Floor, 'C' Building |
14:30 |
Sequence analysis, database searching, (cont.) |
David Judge |
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18:00 |
BUS TO HOTEL |
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WEDNESDAY, 27 June |
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08:30 |
Pick-up from Hotel |
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09:00 |
Sequence analysis, database searching, (cont.) |
David Judge |
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11:00 |
BREAK |
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11:30 |
Sequence analysis, database searching, (cont.) |
David Judge |
13:30 |
LUNCH |
Cafeteria, Ground Floor, Building C |
14:30 |
KEGG: Kyoto Encyclopedia of Genes and Genomes |
Minoru Kanehisa, Kyoto University |
18:00 |
BUS TO HOTEL |
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THURSDAY, 28 June |
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08:30 |
Pick-up from Hotel |
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09:00 | The European Bioinformatics Institute (EBI) services: searches, functional genomics and pathway databases |
Gabriella Rustici EBI, Hinxton, UK
 Get Tutorial |
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11:00 |
BREAK |
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11:30 |
The EBI services (cont.) |
Gabriella Rustici |
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13:30 |
LUNCH |
Cafeteria, Ground Floor, Building C |
14:30 |
The EBI services (cont.) |
Gabriella Rustici |
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18:00 |
BUS TO HOTEL |
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FRIDAY, 29 June |
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08:30 |
Pick-up from Hotel |
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09:00 |
The National Center for Biotechnology Information (NCBI) services, nucleic acid databases |
Leonardo Marino Ramirez, NCBI , NIH, Bethesda, MD, USA
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11:00 |
BREAK |
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11:30 |
NCBI services (cont.) |
Leonardo Marino Ramirez |
13:30 |
LUNCH |
Cafeteria, Ground Floor, Building C |
14:30 |
Next-generation sequencing data analysis using open source software |
Leonardo Marino Ramirez |
18:00 |
BUS TO HOTEL |
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SATURDAY, 30 June |
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08:30 |
Pick-up from Hotel |
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09:00 |
Genome computing, phylogeny |
Martin Bishop, Cambridge, UK, David Judge
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10:30 |
BREAK |
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11:00 |
Genome computing, phylogeny (cont.) |
Martin Bishop, David Judge |
13:00 |
LUNCH |
ICGEB premises, ‘W’ Building |
14:00 |
Protein sequence databases, UniProt |
Elisabeth Gasteiger , SIB Swiss Institute of Bioinformatics, Geneva, Switzerland
Get Tutorial |
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18:00 |
BUS TO HOTEL |
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