International Centre for Genetic Engineering and Biotechnology
Practical Course
"Bioinformatics: Computer Methods in Molecular and Systems Biology"
AREA Science Park - Trieste, ITALY
23 - 27 May 2016
PRELIMINARY PROGRAMME
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MONDAY, 23 May |
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08:00 |
Pick-up from Hotel Roma |
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08:30 |
Course Registration |
ICGEB Foyer, 'W' Building |
09:15 |
Welcome Address |
ICGEB Seminar room, 'W' Building |
09:30 |
Bioinformatics and knowledge representation: theoretical intro to the course |
Sándor Pongor, Pázmány University, Budapest, HU |
10:45 |
Coffee break |
‘C’ Building, Area Science Park |
11:15 |
The course computer infrastructure |
Sanjarbek Hudaiberdiev, NCBI, NIH, Bethesda, MD, US |
12:30 |
Bioinformatics Databases |
Sándor Pongor Get Tutorial |
13:30 | LUNCH | Cafeteria, Ground Floor, 'C' Building |
14:30 |
Sequence analysis, database searching (BLAST) |
Sanjarbek Hudaiberdiev |
17:00 |
Get-Together Party |
ICGEB Foyer, 'W' Building |
18:00 | BUS TO HOTEL |
|
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TUESDAY, 24 May |
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08:30 |
Pick-up from Hotel |
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09:00 |
Intro to Linux (fun with UNIX) |
Christoph W. Sensen, Technical University, Graz, Austria |
11:00 |
Coffee break |
‘C’ Building, Area Science Park |
11:30 |
Multiple alignment, tree-building |
Christoph W. Sensen |
13:30 | LUNCH | Cafeteria, Ground Floor, 'C' Building |
14:30 |
Phylogenetics |
Christoph W. Sensen |
18:00 | BUS TO HOTEL |
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WEDNESDAY, 25 May |
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08:30 |
Pick-up from Hotel |
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09:00 |
Next-generation sequencing data analysis using open source software |
Leonardo Marino-Ramirez, NCBI, NIH, Bethesda, MD, US |
11:00 |
Coffee break |
‘C’ Building, Area Science Park |
11:30 |
Next-generation sequencing data analysis using open source software |
Leonardo Marino-Ramirez |
13:30 | LUNCH | Cafeteria, Ground Floor, 'C' Building |
14:30 |
Next-generation sequencing data analysis using open source software |
Leonardo Marino-Ramirez |
18:00 | BUS TO HOTEL |
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THURSDAY, 26 May |
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08:30 |
Pick-up from Hotel |
|
09:00 |
Genome annotation and Metagenomics |
Christoph W. Sensen |
11:00 |
Coffee break |
‘C’ Building, Area Science Park |
11:30 |
Genome annotation and Metagenomics |
Christoph W. Sensen |
13:30 | LUNCH | Cafeteria, Ground Floor, 'C' Building |
14:30 |
Genome annotation and Metagenomics |
Christoph W. Sensen |
18:00 | BUS TO HOTEL |
|
|
FRIDAY, 27 May |
|
08:30 |
Pick-up from Hotel |
|
09:00 |
Chip-seq, RNA-seq, expression analysis |
Leonardo Marino-Ramirez |
11:00 |
Coffee break |
‘C’ Building, Area Science Park |
11:30 |
Chip-seq, RNA-seq, expression analysis |
Leonardo Marino-Ramirez |
13:30 | LUNCH | Cafeteria, Ground Floor, 'C' Building |
14:30 |
Chip-seq, RNA-seq, expression analysis |
Leonardo Marino-Ramirez |
18:00 | Course Ends, BUS TO HOTEL |