International Centre for Genetic Engineering and Biotechnology
Practical Course
"Bioinformatics: Computer Methods in Molecular and Systems Biology"
AREA Science Park - Trieste, ITALY
25 - 29 June 2018
PRELIMINARY PROGRAMME
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MONDAY, 25 June |
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08:00 |
Pick-up from Hotel Roma |
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08:30 |
Course Registration |
ICGEB Foyer, 'W' Building |
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09:15 |
Welcome Address |
ICGEB Seminar room, 'W' Building  Get Tutorial
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09:30 |
Bioinformatics and knowledge representation: theoretical intro to the course |
Sándor Pongor, Pázmány University, Budapest, HU |
10:45 |
Coffee break |
‘C’ Building, Area Science Park |
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11:15 |
The course computer infrastructure and computer configuration |
Leonardo Mariño-Ramirez, NCBI, NIH, Bethesda, MD, US |
12:30 |
Bioinformatics Databases |
Sándor Pongor Get Tutorial
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| 13:30 | LUNCH | Cafeteria, Ground Floor, 'C' Building |
14:30 |
Sequence analysis, database searching (BLAST) |
Leonardo Mariño-Ramirez |
17:00 |
Get-Together Party |
ICGEB Foyer, 'W' Building |
| 18:00 | BUS TO HOTEL |
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TUESDAY, 26 June |
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08:30 |
Pick-up from Hotel |
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09:00 |
Fun with UNIX |
Christoph W. Sensen, Technical University, Graz, Austria |
11:00 |
Coffee break |
‘C’ Building, Area Science Park |
11:30 |
Multiple Sequence Alignment |
Christoph W. Sensen Get Tutorial
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| 13:30 | LUNCH | Cafeteria, Ground Floor, 'C' Building |
14:30 |
Phylogenetics, Tree Building |
Christoph W. Sensen Get Tutorial
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| 18:00 | BUS TO HOTEL |
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WEDNESDAY, 27 June |
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08:30 |
Pick-up from Hotel |
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09:00 |
Brief introduction to NGS technologies (Illumina, PacBio, Oxford Nanopore) Genome Annotation |
Sándor Pongor Christoph W. Sensen |
11:00 |
Coffee break and Group Photo |
‘C’ Building, Area Science Park |
11:30 |
Metagenomics |
Christoph W. Sensen Get Tutorial
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| 13:30 | LUNCH | Cafeteria, Ground Floor, 'C' Building |
14:30 |
Data Integration from 2D to 4D Introduction DNA-based Markers for disease detection Introduction |
Christoph W. Sensen Get Tutorial
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| 18:00 | BUS TO HOTEL |
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THURSDAY, 28 June |
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08:30 |
Pick-up from Hotel |
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09:00 |
Proteomics |
Michael P. Myers, ICGEB, Trieste |
11:00 |
Coffee break |
‘C’ Building, Area Science Park |
11:30 |
Proteomics |
Michael P. Myers |
| 13:30 | LUNCH | Cafeteria, Ground Floor, 'C' Building |
14:30 |
Proteomics |
Michael P. Myers |
| 18:00 | BUS TO HOTEL |
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FRIDAY, 29 June |
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08:30 |
Pick-up from Hotel |
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09:00 |
Chip-seq, RNA-seq, expression analysis |
Leonardo Marino-Ramirez |
11:00 |
Coffee break |
‘C’ Building, Area Science Park |
11:30 |
Chip-seq, RNA-seq, expression analysis |
Leonardo Marino-Ramirez |
| 13:30 | LUNCH | Cafeteria, Ground Floor, 'C' Building |
14:30 |
Chip-seq, RNA-seq, expression analysis |
Leonardo Marino-Ramirez |
| 18:00 | Course Ends, BUS TO HOTEL |
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